+91 98107 55366
GST services

GST Reconciliation — match every rupee of credit and liability

We reconcile your books with GSTR-1, GSTR-3B, GSTR-2B and e-way bill data every month and fix differences before they become notices.

Call +91 98107 55366
  • Free consultation, clear written quote
  • Checked by experienced professionals
  • Online process — no office visit needed
  • Support after filing, not just before

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GST Reconciliation in brief

GST reconciliation compares your accounting records with what is reported on the GST portal — sales in GSTR-1, tax paid in GSTR-3B and purchases in GSTR-2B. It confirms that you claim only eligible input tax credit and have not under-reported sales. It should be done every month and before the annual return.

Reconciliation is the control that holds the GST system together. Input tax credit may be claimed only if the supplier has reported the invoice and it appears in your GSTR-2B; sales that do not match between books and returns create exposure; and the annual return must tie to your audited accounts.

Our reconciliation service has four tracks: ITC reconciliation (books versus GSTR-2B), sales reconciliation (books versus GSTR-1 and GSTR-3B), e-way bill and e-invoice cross-checks, and annual reconciliation of GSTR-9 with the financial statements. We prepare supplier follow-up lists so that missing invoices can be chased with the right evidence.

A good reconciliation process is not a one-time clean-up. We define a monthly routine so the gap between books and returns stays small, and so that the audit, loan or investor due diligence does not become a project.

Who needs it

Who should use GST Reconciliation

  • Businesses with large purchase volumes from many suppliers.
  • Companies preparing GSTR-9 and GSTR-9C for the year.
  • Taxpayers who received ITC mismatch or scrutiny notices.
  • Exporters and manufacturers with high input tax credit.
  • Accounts teams migrating from manual systems to Zoho Books, Tally or other software.
Benefits

Why it matters for your business

Eligible ITC only

Credits claimed match GSTR-2B and rules, avoiding reversals with interest.

Supplier accountability

Automatic lists of missing or mismatched invoices for follow-up.

Consistent reporting

Sales in books, GSTR-1 and GSTR-3B tie out, lowering the notice risk.

Audit-ready file

Reconciliation working papers can be handed to auditors and officers on request.

Our process

How we deliver GST Reconciliation

A transparent, step-by-step process with a named expert at every stage.

  1. Import and clean data

    Books and portal data are imported, formatted and de-duplicated.

  2. Match and classify

    Invoices are matched by GSTIN, number, date and value; differences are classified as timing, supplier default, rate or data errors.

  3. Resolve

    We prepare follow-up lists for suppliers, pass correcting entries and revise returns where needed.

  4. Report

    You get a monthly report showing ITC claimed, available, at risk and reversed.

Documents

Documents and information required

  • Purchase register and sales register for the period
  • GSTR-2B and GSTR-2A downloads
  • Filed GSTR-1 and GSTR-3B
  • E-way bill report and e-invoice (IRN) report
  • Credit note and debit note registers
  • Trial balance (for annual reconciliation)
Avoid errors

Common mistakes we help you avoid

  • Claiming ITC based on books alone without checking GSTR-2B.
  • Not reversing ITC when payment to supplier lapses beyond the allowed period where the rule applies.
  • Ignoring credit notes raised after year-end.
  • Mixing taxable and exempt supplies without proportionate ITC reversal.
  • Leaving reconciliation to the annual return stage.
Ongoing compliance

How we help you stay compliant after GST Reconciliation

Our monthly cycle completes before GSTR-3B is filed, so the claim you make is already reconciled. Differences that cannot be resolved by the due date are held back and carried to the next period with documentation.

We maintain a supplier scorecard so you know which vendors regularly delay filings, helping you negotiate terms or change suppliers when credit loss becomes a pattern.

Where we serve

GST Reconciliation across 37 locations

Local guidance for businesses in Delhi NCR, Haryana, Uttar Pradesh, Bihar and Jharkhand.

Related services

Services that work together with GST Reconciliation

GST Return Filing

Monthly and quarterly GSTR-1, GSTR-3B, CMP-08, GSTR-4 and annual returns filed accurately and on time.

Learn more

GST Audit

GST health checks, departmental audit support and annual return reconciliation to reduce notices and penalties.

Learn more

Zoho Books Services

Zoho Books implementation, GST set-up, e-invoicing, migration and training by a Zoho Authorized Partner.

Learn more

Accounting & Bookkeeping

Monthly bookkeeping, bank reconciliation, payroll inputs and management reports tied to GST and tax filings.

Learn more

GST Assessment

Replies to scrutiny, show-cause and demand notices with documentation, legal drafting and appeal support.

Learn more

View all services

FAQs

GST Reconciliation — frequently asked questions

What is GSTR-2B and why does it matter?

GSTR-2B is an auto-drafted statement of input tax credit available to you for a month, based on suppliers’ GSTR-1 filings. ITC is generally allowed only for invoices that appear here.

How often should I reconcile GST?

Monthly, before filing GSTR-3B. A deeper reconciliation should be completed before filing the annual return.

What if a supplier has not filed GSTR-1?

The invoice will not appear in your GSTR-2B. We follow up with the supplier, hold the credit and claim it in the month it appears, within the time limit.

Can reconciliation be automated?

Yes. In Zoho Books and similar tools, GSTR-2B matching can be automated; we configure and review it to make sure exceptions are handled.

Does reconciliation reduce notices?

It is the single most effective step. Most system-generated notices come from mismatches that monthly reconciliation would have caught.

Talk to an expert about GST Reconciliation

Get a clear plan, timeline and quote within one call.

Call +91 98107 55366